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Mastering online payment processing: a complete guide for marketplaces

Published on February 20, 2025

Online payment processing

In today’s digital economy, online payment processing is the backbone of successful marketplaces. Efficient and secure payment handling ensures seamless transactions between buyers and sellers, fosters trust, and enhances user experience. However, marketplace payments come with unique challenges, from regulatory compliance to multi-vendor payouts.

This guide provides a comprehensive overview of online payment processing, covering how it works, the basics of online payment, the different types of payments, and how marketplaces can choose the best payment solution.

What is online payment processing and why does it matter for marketplaces?

Definition of online payment processing

Online payment processing refers to the secure transfer of funds from a customer’s payment method (credit card, bank account, digital wallet, etc.) to the merchant’s account, facilitated by payment service providers (PSPs) and financial institutions.

Key stakeholders in online payments

  • Merchant (Marketplace): The platform that facilitates transactions between buyers and sellers.
  • Customer: The end-user making the purchase.
  • Payment Service Provider (PSP): The company handling payment transactions and compliance.
  • Acquiring bank: The financial institution that processes the payment on behalf of the merchant.
  • Issuing bank: The customer’s bank, which authorizes and funds the transaction.
  • Payment networks: Companies like Visa, Mastercard, and local schemes that facilitate card transactions.

How does online payment processing work?

Key players in an online transaction

To understand online payment processing, it’s essential to know the role of each participant:

  • Marketplace: Acts as the intermediary between buyers and sellers.
  • Payment processor: Routes the transaction data securely.
  • Financial Institutions: Authorize, settle, and clear payments.

 

The step-by-step process of an online payment transaction

Understanding the process of online payment transactions is essential for marketplaces that want to ensure smooth and secure payments. Here’s how a typical transaction unfolds:

  1. Payment initiation: The customer selects a product or service on the marketplace and proceeds to checkout. They enter their payment details, such as credit card information, bank account details, or use a digital wallet.
  2. Transaction authorization: The marketplace’s payment gateway encrypts the transaction details and sends them to the payment processor. The processor forwards the request to the issuing bank for authorization.
  3. Fraud Checks and authentication: The issuing bank verifies the customer’s identity, checks for fraud risks, and ensures sufficient funds are available. If required, additional authentication (such as 3D Secure) is triggered.
  4. Payment approval or decline: The issuing bank sends a response (approval or decline) back to the payment processor, which then relays the information to the payment gateway and marketplace.
  5. Funds capture and settlement: Once approved, the payment is temporarily held until the merchant (marketplace) captures it for settlement. Settlement typically takes place within one to three business days.
  6. Payout distribution: If the marketplace operates with multiple vendors and third-party sellers, the funds must be split and distributed accordingly. Some PSPs offer automated split payments to streamline this process.
  7. Reconciliation and reporting: The marketplace receives a detailed report of all transactions, including successful payments, failed attempts, and chargebacks if applicable.

 

The role of compliance and security

Ensuring compliance with payment regulations and security standards is crucial for marketplaces handling sensitive financial transactions. Several layers of security and legal requirements must be met to prevent fraud, money laundering, and data breaches.

  • KYC (Know Your Customer) and AML (Anti-Money Laundering): Marketplaces must verify the identity of sellers and buyers to prevent fraudulent activities and comply with international anti-money laundering laws.
  • PSD2 and Strong Customer Authentication (SCA): In Europe, the Revised Payment Services Directive (PSD2) mandates strong authentication methods, such as two-factor authentication (2FA), to enhance transaction security.
  • PCI-DSS compliance: The Payment Card Industry Data Security Standard (PCI-DSS) ensures that merchants securely handle, process, and store cardholder data.
  • Fraud prevention and risk management: AI-driven fraud detection tools analyze transaction patterns, flag suspicious activities, and implement measures like velocity checks and chargeback management to minimize risks.
  • Data encryption and tokenization: Payment data should be encrypted both in transit and at rest, while tokenization replaces sensitive card details with unique identifiers to prevent data exposure.

 

What are the different types of online payments?

Marketplaces cater to a diverse audience, and offering multiple payment methods is essential to accommodate customer preferences. Here are the main types of online payments:

Bank transfers and Account-to-Account (A2A) payments

Bank transfers enable direct fund transfers between customers and merchants without intermediaries like card networks. Popular methods include:

  • SEPA (Single Euro Payments Area): A standardized bank transfer system used across Europe, reducing cross-border payment complexities.
  • Open Banking payments: Enabled by PSD2, open banking allows customers to pay directly from their bank accounts with enhanced security, such as Pay By Bank.

Online card payments

Credit and debit card payments remain the most widely used online payment method. Key considerations include:

  • Global card networks: Visa, Mastercard, and local card schemes.
  • Security protocols: Tokenization, 3D Secure, and fraud detection mechanisms.
  • Chargebacks and dispute management: Handling refunds and disputes effectively is crucial for marketplaces to maintain financial stability.

Digital wallets and alternative payment methods

  • Digital wallets: Services like PayPal, Apple Pay, and Google Pay offer quick and secure payments.
  • Buy Now, Pay Later (BNPL): Providers like Klarna and Affirm allow customers to split payments over time.
  • Cryptocurrency payments: Some marketplaces are adopting Bitcoin and stablecoins for borderless transactions.
     

How to set up online payment processing for a marketplace?

Setting up online payment processing is a crucial step for any marketplace, ensuring smooth transactions between buyers and sellers while maintaining compliance with financial regulations. Here’s how to get started.

1. Choosing a Payment Service Provider (PSP)

Selecting the right Payment Service Provider (PSP) is key to offering a seamless payment experience. Consider the following factors:

  • Compliance and security: Ensure the PSP complies with regulatory requirements (e.g., PSD2, PCI-DSS) to protect transactions and user data.
  • User Experience: A frictionless checkout process reduces cart abandonment and improves conversions.
  • Geographic coverage: Choose a PSP that supports multiple currencies and local payment methods to expand your reach.
  • Scalability: Your PSP should be able to grow with your marketplace, handling increasing transaction volumes and new business models.

2. Understanding payment flows and revenue models

Marketplaces have unique payment needs that require tailored solutions or several options. Common models include:

  • Split payments: Automatically distribute funds among multiple sellers in a single transaction, ensuring quick and transparent payouts.
  • Escrow services: Secure funds in an escrow account until goods are delivered or services are fulfilled, reducing disputes.
  • Payout scheduling: Choose between instant payouts or scheduled settlements to optimize cash flow for your vendors.

3. Integrating payments into the platform

Integration should be seamless and adaptable to your marketplace’s needs. Options include:

  • API-based integrations: Fully customizable payment solutions that enable direct integration into your platform’s backend.
  • Hosted payment pages: Secure, ready-made checkout pages that simplify compliance and reduce development efforts.
  • Plugins & SDKs: Pre-built integrations for e-commerce platforms like Adobe Commerce (Magento), Shopify, or WooCommerce, allowing quick deployment.

 

By choosing the right PSP, defining clear payment flows, and ensuring smooth integration, your marketplace can provide a secure and efficient payment experience, boosting trust and conversion rates.

Masterclass : How to become a successful marketplace: master processes, growth, and payments

What is a payment gateway and how is it different from a PSP?

Definition and role of a payment gateway

A payment gateway is a crucial technology that acts as a secure bridge between your marketplace and the broader financial system. It encrypts and transmits payment data from customers to the acquiring bank, ensuring sensitive financial information remains protected throughout the transaction process.

Payment gateway vs. Payment Service Provider (PSP)

Key differences between payment gateways and PSPs include:

  • Scope of services: A payment gateway primarily handles secure transaction data transmission and basic payment authorization, while a PSP offers a full suite of payment solutions, including gateway services, merchant accounts, compliance management, and fund settlement.
  • Integration and management: Using a payment gateway often requires separate merchant accounts and additional integrations. In contrast, a PSP provides an all-in-one solution with a unified integration process, simplifying management.
  • Features and capabilities: Payment gateways focus on essential payment processing and security features, whereas PSPs offer advanced functionalities such as split payments, automated KYC, multi-currency support, and fraud prevention tools.

 

Key challenges in marketplace payment processing

While online payments have evolved, marketplaces still face key challenges:

  • Fraud and chargebacks: Online transactions are more prone to fraud. Implementing AI-powered fraud detection and strong authentication (SCA) can mitigate risks.
  • Regulatory complexity: Marketplaces operating across multiple regions must comply with varying financial regulations. A PSP with multi-country licensing ensures hassle-free compliance.
  • Multi-vendor transactions: Managing payments across multiple sellers requires robust split payment and escrow capabilities to ensure fair and timely fund distribution.

The payment industry is evolving rapidly, bringing new opportunities for marketplaces:

  • Embedded finance: Marketplaces are launching their own financial services, such as lending or insurance, to create additional revenue streams.
  • Real-time payments: Instant bank transfers are gaining traction, enabling vendors to receive funds faster without relying on traditional card networks.
  • AI and fraud prevention: Machine learning-driven fraud detection is enhancing security while minimizing false positives in risk assessments.
  • Open Banking: Direct bank payments are reducing reliance on card schemes, lowering transaction fees and improving payment efficiency.

 

Why choosing Lemonway as a payment solution for marketplaces?

Choosing the right Payment Service Provider (PSP) is crucial for a marketplace’s success. Lemonway stands out as a leading solution, offering secure, compliant, and scalable payment services tailored to the unique needs of marketplaces.

A PSP designed for marketplace needs

Lemonway is built to handle the complexities of multi-vendor payments, ensuring seamless transactions while maintaining regulatory compliance. Key features include:

  • Automated KYC and compliance: Streamlined onboarding with automated Know Your Customer (KYC) verification, reducing friction for vendors.
  • Split payments and escrow services: Securely distribute funds between multiple sellers and hold payments in escrow until transactions are completed, enhancing buyer and seller trust.
  • PSD2-compliant solutions: Adhering to the latest European payment regulations, ensuring compliance with Strong Customer Authentication (SCA) and data security requirements.

A pan-european coverage 

Operating across Europe, Lemonway provides marketplaces with a payment infrastructure adapted to regional needs:

  • Multi-currency and local payment support: Accept payments in multiple currencies and leverage preferred local payment methods to expand globally.
  • Full compliance with EU financial regulations: Stay ahead of regulatory requirements with a PSP that meets European Union financial standards.

How Lemonway helps you scale securely

Lemonway doesn’t just process payments—it helps marketplaces grow with confidence:

  • API & developer-friendly integration: Flexible APIs and ready-to-use tools make it easy for developers to integrate and automate payments efficiently.
  • Case studies and success stories: Proven track record of supporting marketplace expansion through seamless payment solutions

 

Mastering online payment processing is essential for marketplace success. From choosing the right PSP to understanding regulatory requirements, each decision impacts user trust and operational efficiency.

For marketplaces looking for a secure, compliant, and scalable payment solution, Lemonway offers a pan-European PSP tailored to marketplace needs.

Ready to optimize the payment processing of your plaform or marketplace? Contact us today!

Our Solutions: Discover our features from Pay-In to Pay-Out

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